File List

Here is a list of all files with brief descriptions:

ad3d.h [code]	Description not yet available
ad_atlas.cpp [code]	Description not yet available
ad_cif.cpp [code]
ad_f1b1.h [code]	Description not yet available
adcomm1.cpp [code]	Description not yet available
adglobl.cpp [code]	Description not yet available
admanip.cpp [code]	Description not yet available
admb_messages.h [code]
admod2.h [code]	Description not yet available
admodel.cpp [code]	Description not yet available
admodel.h [code]	Description not yet available
admodhd.h [code]	Description not yet available
adoption.hpp [code]
adpool.cpp [code]	Description not yet available
adpool.h [code]	Description not yet available
adpvm.h [code]	Description not yet available
adpvm2.cpp [code]	Description not yet available
adpvm2.h [code]	Description not yet available
adrndeff.h [code]	Description not yet available
adsleep.cpp [code]	Description not yet available
adsplus.h [code]	Description not yet available
adstring.hpp [code]
adstring_array.cpp [code]
alk.cpp [code]	Age-length probability transition matrix
amoeba.cpp [code]	Description not yet available
atoi.cpp [code]
banner.cpp [code]
baranov.cpp [code]	Routines for iteratively solving the Baranov catch equation
bet_rand.cpp [code]	Description not yet available
linad99/bounder.cpp [code]	Description not yet available
df1b2-separable/bounder.cpp [code]	Description not yet available
boundfun.cpp [code]	Description not yet available
c_ghk.cpp [code]	Description not yet available
cbetdev.cpp [code]	Description not yet available
cbivnorm.cpp [code]	Description not yet available
ccumdbetainv_incbet.cpp [code]	Description not yet available
ccumdexp.cpp [code]	Description not yet available
ccumdlog.cpp [code]	Description not yet available
cgamdens.cpp [code]	Description not yet available
cgamdev.cpp [code]	This file deals with the Incomplete Gamma Functions of constant types
cifstrem.cpp [code]	Implementation of the cifstream class
cifstrem.h [code]	Definition of the cifstream class
cinvcumdt.cpp [code]	Description not yet available
clist.cpp [code]
clist.h [code]
clrscr.cpp [code]	Description not yet available
cmpdif10.cpp [code]	Description not yet available
cmpdif11.cpp [code]	Description not yet available
cmpdif2.cpp [code]	Description not yet available
cmpdif3.cpp [code]	Description not yet available
cmpdif4.cpp [code]	Description not yet available
cmpdif5.cpp [code]	Description not yet available
cmpdif6.cpp [code]	Description not yet available
cmpdif7.cpp [code]	Description not yet available
cmpdif8.cpp [code]	Description not yet available
cmpdif9.cpp [code]	Description not yet available
cnegbin.cpp [code]	Description not yet available
cnorlogmix.cpp [code]	Description not yet available
cnormgam.cpp [code]	Description not yet available
cnormmix.cpp [code]	Description not yet available
combc.cpp [code]	This file has routines for the constant type log-factorial, log-binomial, and log-gamma functions
combv.cpp [code]	This file has routines for the variable type log-factorial, log-binomial, and log-gamma functions
compare.cpp [code]	Description not yet available
conjprod.cpp [code]	Description not yet available
cranfill.cpp [code]	Description not yet available
cregress.cpp [code]	Description not yet available
cspline.cpp [code]	Contains routines for cubic spline interpolation for constant types
cumd_cau.cpp [code]	Description not yet available
cumdist.cpp [code]	Description not yet available
d3_io.cpp [code]	Description not yet available
d3_io1.cpp [code]	Description not yet available
d3arr.cpp [code]	Description not yet available
d3arr1.cpp [code]	Description not yet available
d3arr10.cpp [code]	Description not yet available
d3arr11.cpp [code]	Description not yet available
d3arr12.cpp [code]	Description not yet available
d3arr2a.cpp [code]	Description not yet available
d3arr2b.cpp [code]	Description not yet available
d3arr2c.cpp [code]	Description not yet available
d3arr3.cpp [code]	Description not yet available
d3arr4.cpp [code]	Description not yet available
d3arr5.cpp [code]	Description not yet available
d3arr6.cpp [code]	Description not yet available
d3arr7.cpp [code]	Description not yet available
d3arr8.cpp [code]	Description not yet available
d3arr9.cpp [code]	Description not yet available
d4_io.cpp [code]	Description not yet available
d4_io1.cpp [code]	Description not yet available
d4arr.cpp [code]	Description not yet available
d4arr.hpp [code]	Description not yet available
d4arr1.cpp [code]	Description not yet available
d4arr2.cpp [code]	Description not yet available
d4arr3.cpp [code]	Description not yet available
d5arr.cpp [code]	Description not yet available
d5arr1.cpp [code]	Description not yet available
d5arr3.cpp [code]	Description not yet available
d6arr.cpp [code]	Description not yet available
d6arr1.cpp [code]	Description not yet available
d6arr2.cpp [code]	Description not yet available
d7arr.cpp [code]	Description not yet available
d7arr1.cpp [code]	Description not yet available
d7arr2.cpp [code]	Description not yet available
dbeta.cpp [code]	Beta density functions
dbinom.cpp [code]	Binomial density functions
ddlist.cpp [code]	Description not yet available
def_eval.cpp [code]	Description not yet available
denorm.cpp [code]	Description not yet available
dep_hess.cpp [code]	Description not yet available
depvars.cpp [code]	Description not yet available
derch.cpp [code]	Description not yet available
df11fun.cpp [code]
df11fun.h [code]
df12fun.cpp [code]	Description not yet available
df12fun.h [code]	Description not yet available
df13fun.cpp [code]	Description not yet available
df13fun.h [code]	Description not yet available
df13incbet.cpp [code]	Description not yet available
df1b2betdev.cpp [code]	Description not yet available
df1b2chkder.cpp [code]	Description not yet available
df1b2cum.cpp [code]	Description not yet available
df1b2f10.cpp [code]	Description not yet available
df1b2f11.cpp [code]	Description not yet available
df1b2f12.cpp [code]	Description not yet available
df1b2f13.cpp [code]	Description not yet available
df1b2f14.cpp [code]	Description not yet available
df1b2f15.cpp [code]	Description not yet available
df1b2f16.cpp [code]	Description not yet available
df1b2f17.cpp [code]	Description not yet available
df1b2f18.cpp [code]	Description not yet available
df1b2f19.cpp [code]	Description not yet available
df1b2f20.cpp [code]	Description not yet available
df1b2f21.cpp [code]	Description not yet available
df1b2f22.cpp [code]	Description not yet available
df1b2f23.cpp [code]	Description not yet available
df1b2f24.cpp [code]	Description not yet available
df1b2f25.cpp [code]	Description not yet available
df1b2f26.cpp [code]	Description not yet available
df1b2f27.cpp [code]	Description not yet available
df1b2f28.cpp [code]	Description not yet available
df1b2fn2.cpp [code]	Description not yet available
df1b2fn3.cpp [code]	Description not yet available
df1b2fn4.cpp [code]	Description not yet available
df1b2fn5.cpp [code]	Description not yet available
df1b2fn7.cpp [code]	Description not yet available
df1b2fn8.cpp [code]	Description not yet available
df1b2fnl.cpp [code]	Description not yet available
df1b2fnl.h [code]	Description not yet available
df1b2fun.cpp [code]	Description not yet available
df1b2fun.h [code]	Description not yet available
df1b2funx.cpp [code]	Description not yet available
df1b2gh.cpp [code]	Description not yet available
df1b2ghmult.cpp [code]	Description not yet available
df1b2glo.cpp [code]	Description not yet available
df1b2h.cpp [code]	Description not yet available
df1b2im2.cpp [code]	Description not yet available
df1b2im3.cpp [code]	Description not yet available
df1b2im3f.cpp [code]	Description not yet available
df1b2im4.cpp [code]	Description not yet available
df1b2im5.cpp [code]	Description not yet available
df1b2imp.cpp [code]	Description not yet available
df1b2impf.cpp [code]	Description not yet available
df1b2impspf.cpp [code]	Description not yet available
df1b2invcumdbeta_incbet.cpp [code]
df1b2lap.cpp [code]	Description not yet available
df1b2lme.cpp [code]	Description not yet available
df1b2lmn2.cpp [code]	Description not yet available
df1b2loc.cpp [code]	Description not yet available
df1b2loc.h [code]	Description not yet available
df1b2lp1.cpp [code]	Description not yet available
df1b2lp10.cpp [code]	Description not yet available
df1b2lp11.cpp [code]	Description not yet available
df1b2lp12.cpp [code]	This file can probably be removed
df1b2lp2.cpp [code]	Description not yet available
df1b2lp4.cpp [code]	Description not yet available
df1b2lp5.cpp [code]	Description not yet available
df1b2lp6.cpp [code]	Description not yet available
df1b2lp7.cpp [code]	Description not yet available
df1b2lp8.cpp [code]	Description not yet available
df1b2lp9.cpp [code]	Description not yet available
df1b2ludcmp.cpp [code]	This file contains the routines necessary to compute the LU decomposition of a matrix with random effects
df1b2ludcmp.hpp [code]
df1b2mat.cpp [code]	Description not yet available
df1b2min.cpp [code]	Description not yet available
df1b2min2.cpp [code]	This file mainly added for defining double_x - df1b2variable_y, which define in df1b2fun.h
df1b2min3.cpp [code]	This file mainly added for defining df1b2variable_x - double_y, which define in df1b2fun.h
df1b2negb.cpp [code]	Description not yet available
df1b2norlogmix.cpp [code]	Description not yet available
df1b2normgam.cpp [code]	Description not yet available
df1b2normmix.cpp [code]	Description not yet available
df1b2normmix2.cpp [code]	Description not yet available
df1b2nv1.cpp [code]	Description not yet available
df1b2pow.cpp [code]	Description not yet available
df1b2prb.cpp [code]	Description not yet available
df1b2prc.cpp [code]	Description not yet available
df1b2prd.cpp [code]	Description not yet available
df1b2ptr.cpp [code]	Description not yet available
df1b2qnm.cpp [code]	Description not yet available
df1b2sum.cpp [code]	Description not yet available
df1b2sumc.cpp [code]	Description not yet available
df1b2test.h [code]	Description not yet available
df1b2tweak.cpp [code]	Description not yet available
df32fun.cpp [code]	Description not yet available
df32fun.h [code]	Description not yet available
df32fun1.cpp [code]	Description not yet available
df33fun.cpp [code]	Description not yet available
df33fun.h [code]	Description not yet available
df33fun1.cpp [code]	Description not yet available
df33incbet.cpp [code]	Description not yet available
df3fun.cpp [code]
df3fun.h [code]
df3gammp.cpp [code]	Description not yet available
df_file.cpp [code]	Description not yet available
df_file2.cpp [code]	Description not yet available
dfadcif.cpp [code]
dfgammp.cpp [code]	This file deals with the Incomplete Gamma Functions of variable types
dfinvcumdt.cpp [code]	Description not yet available
dflocmin.cpp [code]	Description not yet available
dflogistic.cpp [code]	Description not yet available
dfpool.cpp [code]	Description not yet available
dfpool.h [code]	Description not yet available
dfqromb.cpp [code]	Contains routines for numerical integration
dfsdmat.cpp [code]	Description not yet available
dftweak.cpp [code]	Description not yet available
dgamma.cpp [code]	Gamma density functions
dinvgamma.cpp [code]	Inverse gamma distribution
dlnorm.cpp [code]	Lognormal density functions
dmat.cpp [code]	Description not yet available
dmat0.cpp [code]	Description not yet available
dmat1.cpp [code]	Description not yet available
dmat10.cpp [code]	Description not yet available
dmat12.cpp [code]	Description not yet available
dmat14.cpp [code]	Description not yet available
dmat15.cpp [code]	Description not yet available
dmat16.cpp [code]	Description not yet available
dmat17.cpp [code]	Description not yet available
dmat18.cpp [code]	Description not yet available
dmat2.cpp [code]	Description not yet available
dmat20.cpp [code]	Description not yet available
dmat21.cpp [code]	Description not yet available
dmat22.cpp [code]	Description not yet available
dmat23.cpp [code]	Description not yet available
dmat24.cpp [code]	Description not yet available
dmat25.cpp [code]	Description not yet available
dmat26.cpp [code]	Description not yet available
dmat27.cpp [code]	Description not yet available
dmat28.cpp [code]	Description not yet available
dmat29.cpp [code]	Description not yet available
dmat30.cpp [code]	Description not yet available
dmat31.cpp [code]	Description not yet available
dmat32.cpp [code]	Description not yet available
dmat33.cpp [code]	Description not yet available
dmat35.cpp [code]	Description not yet available
dmat36.cpp [code]	Description not yet available
dmat37.cpp [code]	Description not yet available
dmat38.cpp [code]	Description not yet available
dmat4.cpp [code]	Description not yet available
dmat41.cpp [code]	Description not yet available
dmat42.cpp [code]	This file deals with the Singular Value Decomposition of a matrix
dmat43.cpp [code]	Description not yet available
dmat6.cpp [code]	Description not yet available
dmat7.cpp [code]	Description not yet available
dmat8.cpp [code]	Description not yet available
dmat9.cpp [code]	Description not yet available
dmat_a.cpp [code]	Description not yet available
dmat_acc.cpp [code]	Description not yet available
dmat_io.cpp [code]	Description not yet available
dmat_io2.cpp [code]	Description not yet available
dmat_io3.cpp [code]	Description not yet available
dmsort.cpp [code]	Description not yet available
dmultinom.cpp [code]	Multinomial distribution
dmvlogistic.cpp [code]	Multivariate logistic negative log likelihood
dnbinom.cpp [code]	Negative binomial density functions
dnorm.cpp [code]	Normal density functions
dos.h [code]
doublind.cpp [code]	Description not yet available
dpois.cpp [code]	Poisson density functions
drancau.cpp [code]	Description not yet available
drangam.cpp [code]	Description not yet available
drannegbin.cpp [code]	Description not yet available
dranpois.cpp [code]	Description not yet available
dsize.cpp [code]	Description not yet available
dunif.cpp [code]	Uniform distribution
dvar.cpp [code]	Description not yet available
dvec_acc.cpp [code]	Description not yet available
dvec_dif.cpp [code]	Description not yet available
dvec_io1.cpp [code]	Description not yet available
dvec_io2.cpp [code]	Description not yet available
dvect10.cpp [code]	Description not yet available
dvect11.cpp [code]	Description not yet available
dvect12.cpp [code]	Description not yet available
dvect13.cpp [code]	Description not yet available
dvect14.cpp [code]	Description not yet available
dvect15.cpp [code]	Description not yet available
dvect16.cpp [code]	Description not yet available
dvect17.cpp [code]	Description not yet available
dvect18.cpp [code]	Description not yet available
dvect19.cpp [code]	Description not yet available
dvect2.cpp [code]	Description not yet available
dvect20.cpp [code]	Description not yet available
dvect21.cpp [code]
dvect22.cpp [code]	Description not yet available
dvect23.cpp [code]	Description not yet available
dvect24.cpp [code]	Description not yet available
dvect25.cpp [code]	Description not yet available
dvect26.cpp [code]	Description not yet available
dvect3.cpp [code]	Description not yet available
dvect4.cpp [code]	Description not yet available
dvect5.cpp [code]	Description not yet available
dvect6.cpp [code]	Description not yet available
dvect7.cpp [code]	Description not yet available
dvect8.cpp [code]	Description not yet available
dvect9.cpp [code]	Description not yet available
dvect_io.cpp [code]	Description not yet available
dvector.cpp [code]	Description not yet available
dvsort.cpp [code]	Has routines for sorting a dvector
dzinbinom.cpp [code]
ecolib.h [code]
eigen_dmat.cpp [code]	Contains routines to find eigenvectors and eigenvalues for constant types
eigen_dvar.cpp [code]	Contains routines to find eigenvectors and eigenvalues for variable types
eplogis.cpp [code]	// Exponential logistic
except.cpp [code]	Description not yet available
linad99/expm.cpp [code]	Matrix exponential function for dvar_matrix
df1b2-separable/expm.cpp [code]	Matrix exponential function for df1b2_matrix
f1b23d1.cpp [code]	Description not yet available
f1b2fnl2.cpp [code]	Description not yet available
f1b2fnl3.cpp [code]	Description not yet available
f1b2fnl4.cpp [code]	Description not yet available
f1b2fnl5.cpp [code]	Description not yet available
f1b2fnl6.cpp [code]	Description not yet available
f1b2lapqd.cpp [code]	Description not yet available
f1b2loc2.cpp [code]	Description not yet available
f1b2loc3.cpp [code]	Description not yet available
f1b2locl.cpp [code]	Description not yet available
f1b2locl.h [code]	Description not yet available
f1b2ma1.cpp [code]	Description not yet available
f1b2sol3.cpp [code]	Description not yet available
f1b2trst.cpp [code]	Description not yet available
f1b2v10.cpp [code]	Description not yet available
f1b2v11.cpp [code]	Description not yet available
f1b2v12.cpp [code]	Description not yet available
f1b2vc1.cpp [code]	Description not yet available
f1b2vc10.cpp [code]	Description not yet available
f1b2vc11.cpp [code]
f1b2vc2.cpp [code]	Description not yet available
f1b2vc3.cpp [code]	Description not yet available
f1b2vc4.cpp [code]	Description not yet available
f1b2vc5.cpp [code]	Description not yet available
f1b2vc6.cpp [code]	Description not yet available
f1b2vc7.cpp [code]	Description not yet available
f1b2vc8.cpp [code]	Description not yet available
f1b2vc9.cpp [code]	Description not yet available
f2c.h [code]	Description not yet available
f3arr.cpp [code]	Description not yet available
f3arr1.cpp [code]	Description not yet available
f3arr10.cpp [code]	Description not yet available
f3arr11.cpp [code]	Description not yet available
f3arr12.cpp [code]	Description not yet available
f3arr13.cpp [code]	Description not yet available
f3arr14.cpp [code]	Description not yet available
f3arr15.cpp [code]	Description not yet available
f3arr16.cpp [code]	Description not yet available
f3arr17.cpp [code]	Description not yet available
f3arr18.cpp [code]	Description not yet available
f3arr19.cpp [code]	Description not yet available
f3arr2.cpp [code]	Description not yet available
f3arr3.cpp [code]	Description not yet available
f3arr4.cpp [code]	Description not yet available
f3arr5.cpp [code]	Description not yet available
f3arr6.cpp [code]	Description not yet available
f3arr7.cpp [code]	Description not yet available
f3arr8.cpp [code]	Description not yet available
f3arr9.cpp [code]	Description not yet available
f4_io.cpp [code]	Description not yet available
f4_io1.cpp [code]	Description not yet available
f4arr.cpp [code]	Description not yet available
f4arr1.cpp [code]	Description not yet available
f4arr2.cpp [code]	Description not yet available
f4arr3.cpp [code]	Description not yet available
f5arr.cpp [code]	Description not yet available
f5arr1.cpp [code]	Description not yet available
f5arr2.cpp [code]	Description not yet available
f5arr3.cpp [code]	Description not yet available
f6arr.cpp [code]	Description not yet available
f6arr1.cpp [code]	Description not yet available
f6arr2.cpp [code]	Description not yet available
f7arr.cpp [code]	Description not yet available
f7arr1.cpp [code]	Description not yet available
f7arr2.cpp [code]	Description not yet available
factors.cpp [code]	Support functions for factor
factors.h [code]	Support functions for factor
fill.cpp [code]	Fills a matrix with a vectorThis function fills a matrix m with a vector v
fmm.cpp [code]	Description not yet available
fmm_cont.cpp [code]	Description not yet available
fmm_disp.cpp [code]	Description not yet available
fmmq.cpp [code]	Description not yet available
fmmq.hpp [code]	Description not yet available
fmmt1.cpp [code]	Description not yet available
fmmtr1.cpp [code]	Description not yet available
fquadpri.cpp [code]
franpois.cpp [code]	Description not yet available
ftweak.cpp [code]	Description not yet available
fv1f1b.hpp [code]	Description not yet available
fvar.hpp [code]	AUTODIF classes
fvar1.cpp [code]	Description not yet available
fvar2.cpp [code]	Description not yet available
fvar3_io.cpp [code]	I/o operations for class dmatrix
fvar_a10.cpp [code]	Description not yet available
fvar_a11.cpp [code]	Functions to compute minimum and maximum of a dvar_vector
fvar_a13.cpp [code]	Description not yet available
fvar_a14.cpp [code]	Dot-product fpor dvar_vector and sum for dvar_vector and dvar_matrix
fvar_a15.cpp [code]	Description not yet available
fvar_a16.cpp [code]	Description not yet available
fvar_a17.cpp [code]	Description not yet available
fvar_a18.cpp [code]	Description not yet available
fvar_a19.cpp [code]	Description not yet available
fvar_a20.cpp [code]	Description not yet available
fvar_a21.cpp [code]	Description not yet available
fvar_a22.cpp [code]	Description not yet available
fvar_a23.cpp [code]	Description not yet available
fvar_a24.cpp [code]	Description not yet available
fvar_a25.cpp [code]	Description not yet available
fvar_a26.cpp [code]	Description not yet available
fvar_a27.cpp [code]	Description not yet available
fvar_a28.cpp [code]	Description not yet available
fvar_a29.cpp [code]	Description not yet available
fvar_a30.cpp [code]	Description not yet available
fvar_a31.cpp [code]	Description not yet available
fvar_a32.cpp [code]	Description not yet available
fvar_a33.cpp [code]	Description not yet available
fvar_a34.cpp [code]	Description not yet available
fvar_a35.cpp [code]	Description not yet available
fvar_a36.cpp [code]	Description not yet available
fvar_a37.cpp [code]	Description not yet available
fvar_a38.cpp [code]	Description not yet available
fvar_a39.cpp [code]	Description not yet available
fvar_a40.cpp [code]	Description not yet available
fvar_a41.cpp [code]	Description not yet available
fvar_a42.cpp [code]	Description not yet available
fvar_a43.cpp [code]	Description not yet available
fvar_a44.cpp [code]	Description not yet available
fvar_a45.cpp [code]	Description not yet available
fvar_a46.cpp [code]	Description not yet available
fvar_a47.cpp [code]	Description not yet available
fvar_a48.cpp [code]	Description not yet available
fvar_a49.cpp [code]	Description not yet available
fvar_a50.cpp [code]	Description not yet available
fvar_a51.cpp [code]	Description not yet available
fvar_a52.cpp [code]
fvar_a53.cpp [code]	Description not yet available
fvar_a54.cpp [code]	Description not yet available
fvar_a55.cpp [code]	Description not yet available
fvar_a56.cpp [code]	Description not yet available
fvar_a57.cpp [code]	Description not yet available
fvar_a58.cpp [code]	Description not yet available
fvar_a59.cpp [code]	Description not yet available
fvar_a60.cpp [code]	Description not yet available
fvar_a61.cpp [code]	Description not yet available
fvar_a62.cpp [code]	Description not yet available
fvar_ar1.cpp [code]
fvar_ar3.cpp [code]	Description not yet available
fvar_ar7.cpp [code]	Description not yet available
fvar_ar8.cpp [code]	Description not yet available
fvar_arr.cpp [code]	Description not yet available
fvar_dif.cpp [code]	Description not yet available
fvar_fn.cpp [code]	Description not yet available
fvar_fn1.cpp [code]	Description not yet available
fvar_fn2.cpp [code]	Description not yet available
fvar_io.cpp [code]	Description not yet available
fvar_io2.cpp [code]	Description not yet available
fvar_m10.cpp [code]	Description not yet available
fvar_m11.cpp [code]	Description not yet available
fvar_m12.cpp [code]	Description not yet available
fvar_m13.cpp [code]	Description not yet available
fvar_m14.cpp [code]	Description not yet available
fvar_m18.cpp [code]	Description not yet available
fvar_m19.cpp [code]	Description not yet available
fvar_m21.cpp [code]	Description not yet available
fvar_m22.cpp [code]	Description not yet available
fvar_m23.cpp [code]	Description not yet available
fvar_m27.cpp [code]	Description not yet available
fvar_m28.cpp [code]	Description not yet available
fvar_m29.cpp [code]	Description not yet available
fvar_m30.cpp [code]	Description not yet available
fvar_m31.cpp [code]	Description not yet available
fvar_m32.cpp [code]	Description not yet available
fvar_m33.cpp [code]	Description not yet available
fvar_m34.cpp [code]	Description not yet available
fvar_m35.cpp [code]	Description not yet available
fvar_m36.cpp [code]	Description not yet available
fvar_m37.cpp [code]	Description not yet available
fvar_m38.cpp [code]	Description not yet available
fvar_m39.cpp [code]	Description not yet available
fvar_m40.cpp [code]	Description not yet available
fvar_m41.cpp [code]	Description not yet available
fvar_m43.cpp [code]	Description not yet available
fvar_m44.cpp [code]	Description not yet available
fvar_m45.cpp [code]	Description not yet available
fvar_m46.cpp [code]	Description not yet available
fvar_m47.cpp [code]	Description not yet available
fvar_m48.cpp [code]	Description not yet available
fvar_m50.cpp [code]	Description not yet available
fvar_m51.cpp [code]	Description not yet available
fvar_m52.cpp [code]	Description not yet available
fvar_m53.cpp [code]	Description not yet available
fvar_m57.cpp [code]	Description not yet available
fvar_ma1.cpp [code]	Description not yet available
fvar_ma2.cpp [code]	Description not yet available
fvar_ma3.cpp [code]	Description not yet available
fvar_ma6.cpp [code]	Description not yet available
fvar_ma7.cpp [code]	Description not yet available
fvar_ma8.cpp [code]	Description not yet available
fvar_ma9.cpp [code]	Description not yet available
fvar_mat.cpp [code]	Description not yet available
fvar_o10.cpp [code]	Description not yet available
fvar_o11.cpp [code]	Description not yet available
fvar_op2.cpp [code]	Description not yet available
fvar_op3.cpp [code]	Description not yet available
fvar_op4.cpp [code]	Description not yet available
fvar_op5.cpp [code]	Description not yet available
fvar_op7.cpp [code]	Description not yet available
fvar_op8.cpp [code]	Description not yet available
fvar_op9.cpp [code]	Description not yet available
fvar_opr.cpp [code]	Description not yet available
fvara_io.cpp [code]	Description not yet available
fvarb_io.cpp [code]	Description not yet available
fvarm1_i.cpp [code]	Description not yet available
fvarm_io.cpp [code]	Description not yet available
fvma_acc.cpp [code]	Description not yet available
gammdev.cpp [code]	Description not yet available
gaussher.cpp [code]	This file has routines used for Gauss-Hermite Quadrature and Gauss-Legendre Quadrature
gccmanip.h [code]
generalized_Ricker1.cpp [code]
generalized_Ricker2.cpp [code]
getbigs.cpp [code]	Description not yet available
getopt.cpp [code]	Description not yet available
Gompertz.cpp [code]
gradchk.cpp [code]	Description not yet available
gradstak.cpp [code]	Description not yet available
gradstrc.cpp [code]	Description not yet available
gs_set.cpp [code]	Functions for setting memory allocation and array limits
gst_read.cpp [code]	Description not yet available
Hassell.cpp [code]
Hill.cpp [code]
histgram.cpp [code]	Description not yet available
HollingII.cpp [code]
HollingIII.cpp [code]
HollingIV.cpp [code]
hs_sparse.cpp [code]
humung.cpp [code]	Description not yet available
hybmcmc.cpp [code]	Description not yet available
i3_io.cpp [code]	Description not yet available
i3arr.cpp [code]	Description not yet available
i3arr1.cpp [code]	Description not yet available
i3arr8.cpp [code]	Description not yet available
i4arr.cpp [code]	Description not yet available
i4io.cpp [code]	Description not yet available
i5arr.cpp [code]	Description not yet available
i5io.cpp [code]	Description not yet available
imat.cpp [code]	Description not yet available
imat1.cpp [code]	Description not yet available
imat10.cpp [code]	Description not yet available
imat2.cpp [code]	Description not yet available
imat3.cpp [code]	Description not yet available
imat4.cpp [code]	Description not yet available
imat5.cpp [code]	Description not yet available
imat6.cpp [code]	Description not yet available
imat7.cpp [code]	Description not yet available
imat8.cpp [code]	Description not yet available
imat9.cpp [code]	Description not yet available
imat_a.cpp [code]	Description not yet available
imat_io.cpp [code]	Description not yet available
imsort.cpp [code]	Description not yet available
indextyp.cpp [code]	Description not yet available
ivec.cpp [code]	Description not yet available
ivec2.cpp [code]	Description not yet available
ivec3.cpp [code]	Description not yet available
ivec4.cpp [code]	Description not yet available
ivec7.cpp [code]	Description not yet available
ivec8.cpp [code]	Description not yet available
ivec9.cpp [code]	Description not yet available
ivec_io1.cpp [code]	Description not yet available
ivect10.cpp [code]	Description not yet available
ivect11.cpp [code]	Description not yet available
ivect6.cpp [code]	Description not yet available
ivect_io.cpp [code]	Description not yet available
ivector.cpp [code]	Description not yet available
ivsort.cpp [code]	Has routines for sorting an ivector
jacob2.cpp [code]	Description not yet available
jacob3.cpp [code]	Description not yet available
jacobclc.cpp [code]	Description not yet available
lbfgs.cpp [code]	Description not yet available
libtype.cpp [code]	Description not yet available
lmat.cpp [code]	Description not yet available
lmat1.cpp [code]	Description not yet available
lmat2.cpp [code]	Description not yet available
lmat3.cpp [code]	Description not yet available
lmat4.cpp [code]	Description not yet available
lmat5.cpp [code]	Description not yet available
lmat6.cpp [code]	Description not yet available
lmat7.cpp [code]	Description not yet available
lmat_a.cpp [code]	Description not yet available
lmat_io.cpp [code]	Description not yet available
lmnewton.cpp [code]
statslib/logistic.cpp [code]
ecolib/logistic.cpp [code]
logistic3.cpp [code]
logisticK.cpp [code]
logit.cpp [code]	Description not yet available
ludcmp.cpp [code]	This file contains the routines necessary to compute the LU decomposition of a matrix
ludcmp.hpp [code]	LU Decomposition classes
ludcmp_det.cpp [code]	This file contains the routines necessary to compute the determinate of a matrix
ludcmp_inv.cpp [code]	This file contains the routines necessary to compute the inverse of a matrix
ludcmp_ln_det.cpp [code]	This file contains the routines necessary to compute the natural log of the determinate of a matrix
ludcmp_operators.cpp [code]	LU Decomposition operators
ludcmp_solve.cpp [code]	This file contains the routines necessary to solve a linear system of equations given in Matrix-vector form
lvec1.cpp [code]	Description not yet available
lvec2.cpp [code]	Description not yet available
lvec_io1.cpp [code]	Description not yet available
lvect_io.cpp [code]	Description not yet available
lvector.cpp [code]	Description not yet available
makesub.cpp [code]	Description not yet available
manip.cpp [code]	Description not yet available
maxmin.cpp [code]	Description not yet available
mc_scale.cpp [code]	Description not yet available
mceval.cpp [code]	Description not yet available
mcmcvar.h [code]	Description not yet available
mconf.h [code]	Header for Cephes Math Library
mem.cpp [code]
mfexp.cpp [code]	Robust exponential functions for variable scalar objects
mfexpcon.cpp [code]	Robust exponential functions for constant scalar objects
mfupper.cpp [code]	Description not yet available
Michaelis_Menten1.cpp [code]
Michaelis_Menten2.cpp [code]
minim.cpp [code]	Description not yet available
mod_hess.cpp [code]
mod_mc.cpp [code]
mod_mc1.cpp [code]
mod_mc2.cpp [code]
mod_mc3.cpp [code]
mod_mc4.cpp [code]
mod_pmin.cpp [code]
mod_prof.cpp [code]
mod_rhes.cpp [code]	Description not yet available
mod_sd.cpp [code]
model.cpp [code]
model10.cpp [code]
model11.cpp [code]
model12.cpp [code]
model13.cpp [code]
model14.cpp [code]
model15.cpp [code]
model16.cpp [code]
model17.cpp [code]
model19.cpp [code]
model2.cpp [code]
model20.cpp [code]
model21.cpp [code]
model22.cpp [code]
model23.cpp [code]
model24.cpp [code]
model26.cpp [code]
model27.cpp [code]
model28.cpp [code]
model29.cpp [code]
model3.cpp [code]
model30.cpp [code]
model31.cpp [code]
model32.cpp [code]
model33.cpp [code]
model34.cpp [code]
model35.cpp [code]
model36.cpp [code]
model37.cpp [code]
model4.cpp [code]
model40.cpp [code]
model41.cpp [code]
model42.cpp [code]
model43.cpp [code]
model44.cpp [code]
model45.cpp [code]
model46.cpp [code]
model47.cpp [code]
model48.cpp [code]
model49.cpp [code]	Description not yet available
model5.cpp [code]
model50.cpp [code]
model51.cpp [code]
model52.cpp [code]
model53.cpp [code]
model53x.cpp [code]
model6.cpp [code]
model7.cpp [code]
model8.cpp [code]
model9.cpp [code]
modhdet.cpp [code]
modspmin.cpp [code]
monomolecular.cpp [code]
monte.cpp [code]
montebds.cpp [code]
multifan.cpp [code]	/Robust normal approximation to the multinomial distribution
multiindex.cpp [code]	Description not yet available
mycif.h [code]
mystuff.hpp [code]
newdar.cpp [code]
newfmin.cpp [code]	Description not yet available
newfunc.cpp [code]	Description not yet available
newhand.cpp [code]	Description not yet available
newmodm2.cpp [code]
newmodm3.cpp [code]
newmodm4.cpp [code]
newmodm5.cpp [code]
newmodmn.cpp [code]
linad99/newredef.h [code]
nh99/newredef.h [code]
newreg2.cpp [code]	Description not yet available
nmonte.cpp [code]
nnewmod2.cpp [code]
nonrectangular_hyperbola.cpp [code]
normmix.cpp [code]	Description not yet available
normmix2.cpp [code]	Description not yet available
nvarcall.cpp [code]	Description not yet available
optmatch.cpp [code]	Description not yet available
orthply2.cpp [code]	Description not yet available
orthpoly.cpp [code]	Description not yet available
para3.cpp [code]
paral3re.cpp [code]
paral5re.cpp [code]
paralle2.cpp [code]
parallel.cpp [code]
param_init_bounded_number_matrix.cpp [code]
param_init_bounded_number_matrix.h [code]
pearsonresiduals.cpp [code]	// Pearson residuals
posfunc.cpp [code]	Description not yet available
posfunv.cpp [code]	Description not yet available
pow_vectorized_RE.cpp [code]
prmonte.cpp [code]
prn_t.h [code]
profmin.cpp [code]
ptr2.cpp [code]	Description not yet available
ptr_vec.cpp [code]	Description not yet available
pvm3.h [code]	Description not yet available
pvm3bor.h [code]	Description not yet available
pvmvar1.cpp [code]
pvmwin.h [code]	Description not yet available
qsort.h [code]	Header for qsort
quadpri.cpp [code]	Description not yet available
randeff.cpp [code]
ranf_ni.cpp [code]	Description not yet available
ranf_ni2.cpp [code]	Description not yet available
ranfill.cpp [code]	Description not yet available
ranfill1.cpp [code]	Description not yet available
ranfill2.cpp [code]	Description not yet available
rannegbn.cpp [code]	Description not yet available
Ricker.cpp [code]
rmvlogistic.cpp [code]	Random multivariate logistic negative log likelihood
rngen.cpp [code]	Description not yet available
rngen.hpp [code]
linad99/s.h [code]
nh99/s.h [code]
safe_mem.h [code]
scbound.cpp [code]	Description not yet available
scbound1.cpp [code]	Description not yet available
sdmat.cpp [code]	Description not yet available
set.cpp [code]	Description not yet available
setin.cpp [code]	Description not yet available
sgradclc.cpp [code]	Description not yet available
shape.cpp [code]	Description not yet available
shared.cpp [code]
shared1.cpp [code]
Shepherd.cpp [code]
signalh.cpp [code]	Description not yet available
size.cpp [code]	Description not yet available
slgrdclc.cpp [code]	Description not yet available
smartbuf.cpp [code]	Description not yet available
smartbuf.h [code]	Description not yet available
spcomm.cpp [code]
spcomm.h [code]
statsLib.h [code]	Library of statistic functionsThis library contains declaratioins for numerous statistical functions that can be used in ADMB TPL files
str.cpp [code]
str_aio.cpp [code]
strcase.cpp [code]
strcase2.cpp [code]
string.cpp [code]
string1.cpp [code]
string2.cpp [code]
string2a.cpp [code]
string3.cpp [code]
string4.cpp [code]
string5.cpp [code]
string5a.cpp [code]
string6.cpp [code]
suballoc.cpp [code]	Description not yet available
svdcmp.h [code]	Description not yet available
tdev.cpp [code]	Description not yet available
temporar.h [code]
tensprod.cpp [code]	Description not yet available
tescl.h [code]
test_trust.cpp [code]	Description not yet available
theta_logistic.cpp [code]
timer.cpp [code]	Description not yet available
trunc.hpp [code]	Description not yet available
tsdfpool.cpp [code]	Description not yet available
ufstream.cpp [code]	Description not yet available
v_ghk.cpp [code]	Description not yet available
val.cpp [code]
vbeta.cpp [code]	Description not yet available
vbetdev.cpp [code]	Description not yet available
vbivnorm.cpp [code]	Description not yet available
vcubicspline.cpp [code]	Cubic spline functions
vcumdbetainv_incbet.cpp [code]	Description not yet available
vcumdcau.cpp [code]	Description not yet available
vcumdexp.cpp [code]	Description not yet available
vcumdist.cpp [code]	Description not yet available
vcumdlog.cpp [code]	Description not yet available
vec_io.cpp [code]
linad99/vgamdens.cpp [code]	Description not yet available
df1b2-separable/vgamdens.cpp [code]	Description not yet available
vgamdev.cpp [code]	This file deals with the Incomplete Gamma Functions of constant types
vinvcumdt.cpp [code]	Description not yet available
vnegbin.cpp [code]	Description not yet available
vnorlogmix.cpp [code]	Description not yet available
vnormgam.cpp [code]	Description not yet available
vrannegbin.cpp [code]	Description not yet available
vregress.cpp [code]	Description not yet available
vspline.cpp [code]	Contains routines for cubic spline interpolation for variable types
vtdev.cpp [code]	Description not yet available
xdoublind.h [code]	Description not yet available
xfmmtr1.cpp [code]	Description not yet available
xgradclc.cpp [code]	Description not yet available
xmodelm3.cpp [code]
xmodelm4.cpp [code]
xmodelm5.cpp [code]
xmonte2.cpp [code]
xxmcmc.cpp [code]
xxmcmc2.cpp [code]
xxmcmc3.cpp [code]